HBV Target gene Detail Information

> SHISA3 Gene Search Result

Gene Information

Gene Name	SHISA3
Gene ID	152573
Gene Full Name	shisa family member 3
Gene Alias	hShisa3
Transcripts	ENSG00000178343
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;Lipid droplets;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Gene Function	Suppressor gene
Uniport_ID	A0PJX4
HGNC ID	HGNC:25159
VEGA ID	OTTHUMG00000161043
OMIM ID	617325
String ID	9606.ENSP00000326445
PharmGKB ID	PA162403293

Target gene [SHISA3] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1006600	chr4	34	2		36	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SHISA3 expression and immune infiltrating cell level correlation result in HBV+ samples
SHISA3 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).