HBV Target gene Detail Information

> SHE Gene Search Result


Gene Information
Gene Name SHE
Gene ID 126669
Gene Full Name Src homology 2 domain containing E
Transcripts ENSG00000169291
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID Q5VZ18
HGNC ID HGNC:27004
VEGA ID OTTHUMG00000036072
OMIM ID 610482
String ID 9606.ENSP00000307369
PharmGKB ID PA142670919
Target gene [SHE] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011107 chr1 10 10 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SHE expression and immune infiltrating cell level correlation result in HBV+ samples
SHE expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).