HTLV1 Target gene Detail Information

> SHANK2 Gene Search Result

Gene Information

Gene Name	SHANK2
Gene ID	22941
Gene Full Name	SH3 and multiple ankyrin repeat domains 2
Gene Alias	SHANK; AUTS17; CORTBP1; CTTNBP1; ProSAP1; SPANK-3
Transcripts	ENSG00000162105
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Nuclear speckles;Vesicles;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9UPX8
HGNC ID	HGNC:14295
VEGA ID	OTTHUMG00000154615
OMIM ID	603290
String ID	9606.ENSP00000469689
PharmGKB ID	PA37867

Target gene [SHANK2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6005226	chr11	72	18	2	92	View
6014359	chr11	15	1		16	View
6020168	chr11	7			7	View
6021385	chr11	4	2		6	View
6021477	chr11	5		1	6	View
6022041	chr11	2	3		5	View
6022776	chr11	4	1		5	View
6029792	chr11	1			1	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).