HTLV1 Target gene Detail Information

> SHANK1 Gene Search Result

Gene Information

Gene Name	SHANK1
Gene ID	50944
Gene Full Name	SH3 and multiple ankyrin repeat domains 1
Gene Alias	SSTRIP; SPANK-1; synamon
Transcripts	ENSG00000161681
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Plasma membrane;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q9Y566
HGNC ID	HGNC:15474
VEGA ID	OTTHUMG00000137380
OMIM ID	604999
String ID	9606.ENSP00000293441
PharmGKB ID	PA37965

Target gene [SHANK1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6013463	chr19	17	2		19	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).