HIV Target gene Detail Information

> SH3RF1 Gene Search Result

Gene Information

Gene Name	SH3RF1
Gene ID	57630
Gene Full Name	SH3 domain containing ring finger 1
Gene Alias	POSH; RNF142; SH3MD2
Transcripts	ENSG00000154447
Virus	HIV
Gene Type	protein coding
HPA Location Info	Vesicles;Intermediate filaments;
HPA Protein Class Info	Enzymes, Predicted intracellular proteins
Uniport_ID	Q7Z6J0
HGNC ID	HGNC:17650
VEGA ID	OTTHUMG00000161010
OMIM ID	618642
String ID	9606.ENSP00000284637
PharmGKB ID	PA134915904

Target gene [SH3RF1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000366	chr4	87	400	26	513	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SH3RF1 expression and immune infiltrating cell level correlation result in HIV+ samples
SH3RF1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).