HBV Target gene Detail Information

> SGCE Gene Search Result

Gene Information

Gene Name	SGCE
Gene ID	8910
Gene Full Name	sarcoglycan epsilon
Gene Alias	ESG; DYT11; epsilon-SG
Transcripts	ENSG00000127990
Virus	HBV
Gene Type	protein coding
HPA Location Info	Plasma membrane;Vesicles;Golgi apparatus;Nucleoplasm;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Disease related genes, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	O43556
HGNC ID	HGNC:10808
VEGA ID	OTTHUMG00000022828
OMIM ID	604149
String ID	9606.ENSP00000398930
PharmGKB ID	PA35719

Target gene [SGCE] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1003564	chr7	27	85	12	124	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SGCE expression and immune infiltrating cell level correlation result in HBV+ samples
SGCE expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).