HPV Target gene Detail Information

> SGCD Gene Search Result

Gene Information

Gene Name	SGCD
Gene ID	6444
Gene Full Name	sarcoglycan delta
Gene Alias	SGD; DAGD; 35DAG; CMD1L; SGCDP; LGMDR6; SG-delta
Transcripts	ENSG00000170624
Virus	HPV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Disease related genes, Predicted membrane proteins
Uniport_ID	Q92629
HGNC ID	HGNC:10807
VEGA ID	OTTHUMG00000163445
OMIM ID	601411
String ID	9606.ENSP00000338343
PharmGKB ID	PA35718

Target gene [SGCD] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5201057	chr5	1		1	2	View
5300482	chr5	1	2	1	4	View
5403052	chr5	9		2	11	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).