HBV Target gene Detail Information

> SFTPD Gene Search Result


Gene Information
Gene Name SFTPD
Gene ID 6441
Gene Full Name surfactant protein D
Gene Alias SP-D; PSP-D; SFTP4; COLEC7
Transcripts ENSG00000133661
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted secreted proteins
Uniport_ID P35247
HGNC ID HGNC:10803
VEGA ID OTTHUMG00000018590
OMIM ID 178635
String ID 9606.ENSP00000361366
Drugbank ID BE0001107
PharmGKB ID PA35715
Target gene [SFTPD] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1014215 chr10 4 4 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SFTPD expression and immune infiltrating cell level correlation result in HBV+ samples
SFTPD expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).