HBV Target gene Detail Information

> SFTA3 Gene Search Result


Gene Information
Gene Name SFTA3
Gene ID 253970
Gene Full Name surfactant associated 3
Gene Alias SPH; SP-H; NANCI; SFTPH
Transcripts ENSG00000257520
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins, Predicted secreted proteins
Uniport_ID P0C7M3
HGNC ID HGNC:18387
VEGA ID OTTHUMG00000170540
OMIM ID 617860
String ID 9606.ENSP00000428331
PharmGKB ID PA164725680
Target gene [SFTA3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011155 chr14 10 10 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SFTA3 expression and immune infiltrating cell level correlation result in HBV+ samples
SFTA3 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).