HTLV1 Target gene Detail Information

> SFT2D1 Gene Search Result


Gene Information
Gene Name SFT2D1
Gene ID 113402
Gene Full Name SFT2 domain containing 1
Gene Alias pRGR1; C6orf83
Transcripts ENSG00000198818
Virus HTLV1
Gene Type protein coding
HPA Location Info Nuclear bodies;Cytosol;Nucleoplasm;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
Uniport_ID Q8WV19
HGNC ID HGNC:21102
VEGA ID OTTHUMG00000016001
String ID 9606.ENSP00000354590
PharmGKB ID PA134962126
Target gene [SFT2D1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6019358 chr6 8 8 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).