HIV Target gene Detail Information

> SFSWAP Gene Search Result

Gene Information

Gene Name	SFSWAP
Gene ID	6433
Gene Full Name	splicing factor SWAP
Gene Alias	SWAP; SFRS8
Transcripts	ENSG00000061936
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytosol;Plasma membrane;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q12872
HGNC ID	HGNC:10790
VEGA ID	OTTHUMG00000168319
OMIM ID	601945
String ID	9606.ENSP00000437738
PharmGKB ID	PA35706

Target gene [SFSWAP] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4004082	chr12	40	5	4	49	View
4005973	chr12	20	2	6	28	View
4014853	chr12		2		2	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SFSWAP expression and immune infiltrating cell level correlation result in HIV+ samples
SFSWAP expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).