HIV Target gene Detail Information

> SFMBT2 Gene Search Result


Gene Information
Gene Name SFMBT2
Gene ID 57713
Gene Full Name Scm like with four mbt domains 2
Transcripts ENSG00000198879
Virus HIV
Gene Type protein coding
HPA Location Info Nuclear speckles;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q5VUG0
HGNC ID HGNC:20256
VEGA ID OTTHUMG00000017630
OMIM ID 615392
String ID 9606.ENSP00000380353
PharmGKB ID PA134866013
Target gene [SFMBT2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4006110 chr10 11 10 6 27 View
4007369 chr10 2 1 16 19 View
4009317 chr10 3 8 1 12 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).