HBV Target gene Detail Information

> SFI1 Gene Search Result


Gene Information
Gene Name SFI1
Gene ID 9814
Gene Full Name SFI1 centrin binding protein
Gene Alias PISD; hSfi1p; PPP1R139
Transcripts ENSG00000198089
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID A8K8P3
HGNC ID HGNC:29064
VEGA ID OTTHUMG00000030249
OMIM ID 612765
String ID 9606.ENSP00000383145
PharmGKB ID PA142670930
Target gene [SFI1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1012402 chr22 6 1 7 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SFI1 expression and immune infiltrating cell level correlation result in HBV+ samples
SFI1 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).