HIV Target gene Detail Information

> SETX Gene Search Result

Gene Information

Gene Name	SETX
Gene ID	23064
Gene Full Name	senataxin
Gene Alias	ALS4; AOA2; Sen1; SCAR1; bA479K20.2
Transcripts	ENSG00000107290
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoplasm;Cytokinetic bridge;
HPA Protein Class Info	Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	Q7Z333
HGNC ID	HGNC:445
VEGA ID	OTTHUMG00000020834
OMIM ID	608465
String ID	9606.ENSP00000224140
PharmGKB ID	PA24751

Target gene [SETX] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4002779	chr9	6	56	18	80	View
4005236	chr9	10	4	20	34	View
4005868	chr9	22	7		29	View
4009488	chr9	2	9		11	View
4009634	chr9	11			11	View
4010453	chr9	9			9	View
4011810	chr9	6			6	View
4013938	chr9	2	1		3	View
4014805	chr9	2			2	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).