HBV Target gene Detail Information

> SETX Gene Search Result


Gene Information
Gene Name SETX
Gene ID 23064
Gene Full Name senataxin
Gene Alias ALS4; AOA2; Sen1; SCAR1; bA479K20.2
Transcripts ENSG00000107290
Virus HBV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytokinetic bridge;
HPA Protein Class Info Disease related genes, Plasma proteins, Predicted intracellular proteins
Uniport_ID Q7Z333
HGNC ID HGNC:445
VEGA ID OTTHUMG00000020834
OMIM ID 608465
String ID 9606.ENSP00000224140
PharmGKB ID PA24751
Target gene [SETX] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1010961 chr9 6 4 10 View
1400555 chr9 46 4 50 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).