HTLV1 Target gene Detail Information

> SERP2 Gene Search Result

Gene Information

Gene Name	SERP2
Gene ID	387923
Gene Full Name	stress associated endoplasmic reticulum protein family member 2
Gene Alias	C13orf21; bA269C23.1
Transcripts	ENSG00000151778
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Endoplasmic reticulum;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q8N6R1
HGNC ID	HGNC:20607
VEGA ID	OTTHUMG00000016833
String ID	9606.ENSP00000368477
PharmGKB ID	PA162402953

Target gene [SERP2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6006128	chr13	18	34	22	74	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE55851 (GEO)	Adult T-cell leukemia	21	Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO)	HTLV-1 associated myelopathy	39	Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851
HeatMap of cell type fractions in all samples	Lollipop of SERP2 expression and immune infiltrating cell level correlation result in HTLV1+ samples
SERP2 expression: Low -> High

> Dataset: GSE29312
HeatMap of cell type fractions in all samples	Lollipop of SERP2 expression and immune infiltrating cell level correlation result in HTLV1+ samples
SERP2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).