HBV Target gene Detail Information

> SEMA4G Gene Search Result


Gene Information
Gene Name SEMA4G
Gene ID 57715
Gene Full Name semaphorin 4G
Transcripts ENSG00000095539
Virus HBV
Gene Type protein coding
HPA Location Info Lipid droplets;Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q9NTN9
HGNC ID HGNC:10735
VEGA ID OTTHUMG00000018922
OMIM ID 618991
String ID 9606.ENSP00000210633
PharmGKB ID PA35657
Target gene [SEMA4G] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1400396 chr10 117 23 11 151 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SEMA4G expression and immune infiltrating cell level correlation result in HBV+ samples
SEMA4G expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).