HIV Target gene Detail Information

> SECISBP2 Gene Search Result


Gene Information
Gene Name SECISBP2
Gene ID 79048
Gene Full Name SECIS binding protein 2
Gene Alias SBP2
Transcripts ENSG00000187742
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Disease related genes, Predicted intracellular proteins
Uniport_ID Q96T21
HGNC ID HGNC:30972
VEGA ID OTTHUMG00000020182
OMIM ID 607693
String ID 9606.ENSP00000364965
PharmGKB ID PA134863749
Target gene [SECISBP2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001101 chr9 155 46 14 215 View
4001292 chr9 133 33 16 182 View
4001539 chr9 99 44 10 153 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).