HIV Target gene Detail Information

> SEC16A Gene Search Result


Gene Information
Gene Name SEC16A
Gene ID 9919
Gene Full Name SEC16 homolog A, endoplasmic reticulum export factor
Gene Alias p250; SEC16L; KIAA0310
Transcripts ENSG00000148396
Virus HIV
Gene Type protein coding
HPA Location Info Golgi apparatus;Endoplasmic reticulum;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID O15027
HGNC ID HGNC:29006
VEGA ID OTTHUMG00000020932
OMIM ID 612854
String ID 9606.ENSP00000325827
PharmGKB ID PA162402611
Target gene [SEC16A] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4002157 chr9 107 2 109 View
4002727 chr9 65 17 82 View
4004111 chr9 11 30 8 49 View
4004813 chr9 12 25 2 39 View
4005465 chr9 31 1 32 View
4006014 chr9 14 14 28 View
4006551 chr9 3 9 12 24 View
4008859 chr9 10 3 13 View
4011342 chr9 3 2 2 7 View
4012617 chr9 4 4 View
4013755 chr9 3 3 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).