HIV Target gene Detail Information

> SDR42E1 Gene Search Result

Gene Information

Gene Name	SDR42E1
Gene ID	93517
Gene Full Name	short chain dehydrogenase/reductase family 42E, member 1
Gene Alias	HSPC105
Transcripts	ENSG00000184860
Virus	HIV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q8WUS8
HGNC ID	HGNC:29834
VEGA ID	OTTHUMG00000166148
OMIM ID	616164
String ID	9606.ENSP00000332407
PharmGKB ID	PA164725636

Target gene [SDR42E1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000793	chr16	50	109	121	280	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SDR42E1 expression and immune infiltrating cell level correlation result in HIV+ samples
SDR42E1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).