HIV Target gene Detail Information

> SDR42E1 Gene Search Result


Gene Information
Gene Name SDR42E1
Gene ID 93517
Gene Full Name short chain dehydrogenase/reductase family 42E, member 1
Gene Alias HSPC105
Transcripts ENSG00000184860
Virus HIV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q8WUS8
HGNC ID HGNC:29834
VEGA ID OTTHUMG00000166148
OMIM ID 616164
String ID 9606.ENSP00000332407
PharmGKB ID PA164725636
Target gene [SDR42E1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000793 chr16 50 109 121 280 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).