HTLV1 Target gene Detail Information

> SDK1 Gene Search Result

Gene Information

Gene Name	SDK1
Gene ID	221935
Gene Full Name	sidekick cell adhesion molecule 1
Transcripts	ENSG00000146555
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Cytosol;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID	Q7Z5N4
HGNC ID	HGNC:19307
VEGA ID	OTTHUMG00000151733
OMIM ID	607216
String ID	9606.ENSP00000385899
PharmGKB ID	PA134957188

Target gene [SDK1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6003748	chr7	127	5	11	143	View
6004109	chr7	20	17	92	129	View
6004562	chr7	94	17	1	112	View
6007442	chr7	38	1	16	55	View
6011973	chr7	23	1		24	View
6013685	chr7	17	1		18	View
6018640	chr7	1	8		9	View
6023985	chr7	4			4	View
6024545	chr7		1	2	3	View
6026762	chr7	1	1		2	View
6027001	chr7	1	1		2	View
6032769	chr7				0	View
6032770	chr7				0	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).