EBV Target gene Detail Information

> SDK1 Gene Search Result


Gene Information
Gene Name SDK1
Gene ID 221935
Gene Full Name sidekick cell adhesion molecule 1
Transcripts ENSG00000146555
Virus EBV
Gene Type protein coding
HPA Location Info Cytosol;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q7Z5N4
HGNC ID HGNC:19307
VEGA ID OTTHUMG00000151733
OMIM ID 607216
String ID 9606.ENSP00000385899
PharmGKB ID PA134957188
Target gene [SDK1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
3000483 chr7 16 16 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).