HPV Target gene Detail Information

> SDE2 Gene Search Result

Gene Information

Gene Name	SDE2
Gene ID	163859
Gene Full Name	SDE2 telomere maintenance homolog
Gene Alias	C1orf55; dJ671D7.1
Transcripts	ENSG00000143751
Virus	HPV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;Cytosol;Golgi apparatus;Plasma membrane;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q6IQ49
HGNC ID	HGNC:26643
VEGA ID	OTTHUMG00000037504
String ID	9606.ENSP00000272091
PharmGKB ID	PA142672506

Target gene [SDE2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
5003689	chr1	2			2	View
5201600	chr1	20	10	12	42	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE140662 (GEO)	Condyloma Acuminatum	8	Condyloma acuminata (HPV+)(5), Skin(3)

> Dataset: GSE140662
HeatMap of cell type fractions in all samples	Lollipop of SDE2 expression and immune infiltrating cell level correlation result in HPV+ samples
SDE2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).