HIV Target gene Detail Information

> SDC2 Gene Search Result

Gene Information

Gene Name	SDC2
Gene ID	6383
Gene Full Name	syndecan 2
Gene Alias	HSPG; CD362; HSPG1; SYND2
Transcripts	ENSG00000169439
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Plasma membrane;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	CD markers, Predicted membrane proteins
Uniport_ID	P34741
HGNC ID	HGNC:10659
VEGA ID	OTTHUMG00000164689
OMIM ID	142460
String ID	9606.ENSP00000307046
Drugbank ID	BE0002116
PharmGKB ID	PA35589

Target gene [SDC2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4007697	chr8	18			18	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).