HBV Target gene Detail Information

> SCTR Gene Search Result


Gene Information
Gene Name SCTR
Gene ID 6344
Gene Full Name secretin receptor
Gene Alias SR
Transcripts ENSG00000080293
Virus HBV
Gene Type protein coding
HPA Location Info
Membrane Info Predicted membrane proteins
HPA Protein Class Info FDA approved drug targets, G-protein coupled receptors, Predicted membrane proteins, Transporters
Uniport_ID P47872
HGNC ID HGNC:10608
VEGA ID OTTHUMG00000131407
OMIM ID 182098
String ID 9606.ENSP00000019103
Drugbank ID BE0000318
PharmGKB ID PA35018
Target gene [SCTR] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1005067 chr2 61 1 62 View
1400504 chr2 3 3 6 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SCTR expression and immune infiltrating cell level correlation result in HBV+ samples
SCTR expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).