Gene Information
Gene Name
|
SCN5A |
Gene ID
|
6331
|
Gene Full Name
|
sodium voltage-gated channel alpha subunit 5 |
Gene Alias
|
HB1; HB2; HH1; IVF; VF1; HBBD; ICCD; LQT3; SSS1; CDCD2; CMD1E; CMPD2; PFHB1; Nav1.5 |
Transcripts
|
ENSG00000183873
|
Virus
|
HBV |
Gene Type
|
protein coding |
HPA Location Info
|
Plasma membrane;Nucleoli;Nucleoplasm;
|
Membrane Info
|
Predicted membrane proteins |
HPA Protein Class Info
|
Disease related genes, FDA approved drug targets, Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins, Transporters, Voltage-gated ion channels |
Uniport_ID
|
Q14524
|
HGNC ID
|
HGNC:10593
|
VEGA ID
|
OTTHUMG00000156166
|
OMIM ID
|
600163 |
String ID
|
9606.ENSP00000410257
|
Drugbank ID
|
BE0000197;
BE0009738;
BE0004901
|
PharmGKB ID
|
PA304
|
Target gene [SCN5A] related to VISs
DVID |
Chromosome |
HM |
TFBS |
CA |
Sum of Overlapped Records |
Detail |
1015601 |
chr3 |
1 |
1 |
|
2 |
View |
1400087 |
chr3 |
3 |
1 |
|
4 |
View |
Relationship between gene expression and immune infiltrating cell level
Data ID |
Disease |
Sample number |
Sample type |
LIHC (TCGA) |
Liver hepatocellular carcinoma |
424 |
Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18) |
> Dataset: LIHC
|
HeatMap of cell type fractions in all samples
|
Lollipop of SCN5A expression and immune infiltrating cell level correlation result in HBV+ samples
|
SCN5A expression: Low -> High
|
|
|
|
|