HIV Target gene Detail Information

> SCLT1 Gene Search Result

Gene Information

Gene Name	SCLT1
Gene ID	132320
Gene Full Name	sodium channel and clathrin linker 1
Gene Alias	CAP1A; CAP-1A
Transcripts	ENSG00000151466
Virus	HIV
Gene Type	protein coding
HPA Location Info
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q96NL6
HGNC ID	HGNC:26406
VEGA ID	OTTHUMG00000133346
OMIM ID	611399
String ID	9606.ENSP00000281142
PharmGKB ID	PA147357369

Target gene [SCLT1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4015544	chr4		1		1	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of SCLT1 expression and immune infiltrating cell level correlation result in HIV+ samples
SCLT1 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).