HIV Target gene Detail Information

> SCLT1 Gene Search Result


Gene Information
Gene Name SCLT1
Gene ID 132320
Gene Full Name sodium channel and clathrin linker 1
Gene Alias CAP1A; CAP-1A
Transcripts ENSG00000151466
Virus HIV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q96NL6
HGNC ID HGNC:26406
VEGA ID OTTHUMG00000133346
OMIM ID 611399
String ID 9606.ENSP00000281142
PharmGKB ID PA147357369
Target gene [SCLT1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4015544 chr4 1 1 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).