HTLV1 Target gene Detail Information

> SCG5 Gene Search Result


Gene Information
Gene Name SCG5
Gene ID 6447
Gene Full Name secretogranin V
Gene Alias 7B2; SgV; P7B2; SGNE1
Transcripts ENSG00000277614
Virus HTLV1
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted secreted proteins
Uniport_ID P05408
HGNC ID HGNC:10816
VEGA ID OTTHUMG00000159447
OMIM ID 173120
String ID 9606.ENSP00000300175
PharmGKB ID PA35724
Target gene [SCG5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6004083 chr15 12 102 15 129 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).