HPV Target gene Detail Information

> SCFD2 Gene Search Result


Gene Information
Gene Name SCFD2
Gene ID 152579
Gene Full Name sec1 family domain containing 2
Gene Alias STXBP1L1
Transcripts ENSG00000184178
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q8WU76
HGNC ID HGNC:30676
VEGA ID OTTHUMG00000160588
String ID 9606.ENSP00000384182
PharmGKB ID PA134953686
Target gene [SCFD2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5201120 chr4 12 2 14 View
5403560 chr4 0 View
5403733 chr4 8 8 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).