HIV Target gene Detail Information

> SCAMP2 Gene Search Result


Gene Information
Gene Name SCAMP2
Gene ID 10066
Gene Full Name secretory carrier membrane protein 2
Transcripts ENSG00000140497
Virus HIV
Gene Type protein coding
HPA Location Info Golgi apparatus;Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins, Transporters
Uniport_ID O15127
HGNC ID HGNC:10564
VEGA ID OTTHUMG00000142817
OMIM ID 606912
String ID 9606.ENSP00000268099
PharmGKB ID PA34977
Target gene [SCAMP2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001503 chr15 3 51 102 156 View
4004127 chr15 21 11 17 49 View
4009535 chr15 6 5 11 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).