HBV Target gene Detail Information

> SCAI Gene Search Result


Gene Information
Gene Name SCAI
Gene ID 286205
Gene Full Name suppressor of cancer cell invasion
Gene Alias NET40; C9orf126
Transcripts ENSG00000173611
Virus HBV
Gene Type protein coding
HPA Location Info Nuclear membrane;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q8N9R8
HGNC ID HGNC:26709
VEGA ID OTTHUMG00000020667
OMIM ID 619222
String ID 9606.ENSP00000362650
PharmGKB ID PA165586233
Target gene [SCAI] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1007450 chr9 27 27 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of SCAI expression and immune infiltrating cell level correlation result in HBV+ samples
SCAI expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).