HIV Target gene Detail Information

> SCAF4 Gene Search Result


Gene Information
Gene Name SCAF4
Gene ID 57466
Gene Full Name SR-related CTD associated factor 4
Gene Alias SRA4; SFRS15
Transcripts ENSG00000156304
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID O95104
HGNC ID HGNC:19304
VEGA ID OTTHUMG00000084903
OMIM ID 616023
String ID 9606.ENSP00000286835
PharmGKB ID PA134903281
Target gene [SCAF4] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4007298 chr21 9 11 20 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).