HIV Target gene Detail Information

> SARNP Gene Search Result

Gene Information

Gene Name	SARNP
Gene ID	84324
Gene Full Name	SAP domain containing ribonucleoprotein
Gene Alias	HCC1; THO1; CIP29; HSPC316
Transcripts	ENSG00000205323
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nuclear speckles;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins
Uniport_ID	P82979
HGNC ID	HGNC:24432
VEGA ID	OTTHUMG00000170441
OMIM ID	610049
String ID	9606.ENSP00000337632
PharmGKB ID	PA165513309

Target gene [SARNP] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4006525	chr12	24			24	View
4012214	chr12	1	3	1	5	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of SARNP expression and immune infiltrating cell level correlation result in HIV+ samples
SARNP expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).