HTLV1 Target gene Detail Information

> SAP30BP Gene Search Result


Gene Information
Gene Name SAP30BP
Gene ID 29115
Gene Full Name SAP30 binding protein
Gene Alias HTRG; HTRP; HCNGP
Transcripts ENSG00000161526
Virus HTLV1
Gene Type protein coding
HPA Location Info Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9UHR5
HGNC ID HGNC:30785
VEGA ID OTTHUMG00000179798
OMIM ID 610218
String ID 9606.ENSP00000462116
PharmGKB ID PA142670955
Target gene [SAP30BP] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6008273 chr17 35 12 47 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE55851 (GEO) Adult T-cell leukemia 21 Normal (3), Asymptomatic carriers (HTLV1+)(6), Adult T-cell Leukemia-lymphoma (HTLV1+)(12)
GSE29312 (GEO) HTLV-1 associated myelopathy 39 Normal (9), Asymptomatic carriers (HTLV1+)(20), HTLV-1-associated myelopathy (HTLV1+)(10)
GSE29332 (GEO) HTLV-1 associated myelopathy 35 Normal (8), Asymptomatic carriers (HTLV1+)(17), HTLV-1-associated myelopathy (HTLV1+)(10)

> Dataset: GSE55851

HeatMap of cell type fractions in all samples Lollipop of SAP30BP expression and immune infiltrating cell level correlation result in HTLV1+ samples
SAP30BP expression: Low -> High

> Dataset: GSE29312

HeatMap of cell type fractions in all samples Lollipop of SAP30BP expression and immune infiltrating cell level correlation result in HTLV1+ samples
SAP30BP expression: Low -> High

> Dataset: GSE29332

HeatMap of cell type fractions in all samples Lollipop of SAP30BP expression and immune infiltrating cell level correlation result in HTLV1+ samples
SAP30BP expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).