HIV Target gene Detail Information

> SAMSN1 Gene Search Result


Gene Information
Gene Name SAMSN1
Gene ID 64092
Gene Alias SLy2; HACS1; NASH1; SASH2; SH3D6B
Transcripts ENSG00000155307
Virus HIV
Gene Type protein coding
HPA Location Info Plasma membrane;Nucleoplasm;
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID Q9NSI8
HGNC ID HGNC:10528
VEGA ID OTTHUMG00000074317
OMIM ID 607978
String ID 9606.ENSP00000285670
PharmGKB ID PA34939
Target gene [SAMSN1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4001060 chr21 198 25 223 View
4001070 chr21 164 32 31 227 View
4003104 chr21 3 58 8 69 View
4003980 chr21 12 38 1 51 View
4005173 chr21 21 5 9 35 View
4013674 chr21 2 1 3 View
4014089 chr21 1 1 2 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).