HTLV1 Target gene Detail Information

> SAMD5 Gene Search Result


Gene Information
Gene Name SAMD5
Gene ID 389432
Gene Full Name sterile alpha motif domain containing 5
Gene Alias dJ875H10.1
Transcripts ENSG00000203727
Virus HTLV1
Gene Type protein coding
HPA Location Info Vesicles;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID Q5TGI4
HGNC ID HGNC:21180
VEGA ID OTTHUMG00000015767
String ID 9606.ENSP00000356444
PharmGKB ID PA134888862
Target gene [SAMD5] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
6012567 chr6 20 2 22 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).