HBV Target gene Detail Information

> SAMD12 Gene Search Result

Gene Information

Gene Name	SAMD12
Gene ID	401474
Gene Full Name	sterile alpha motif domain containing 12
Transcripts	ENSG00000177570
Virus	HBV
Gene Type	protein coding
HPA Location Info	Cytosol;Golgi apparatus;
HPA Protein Class Info	Predicted intracellular proteins
Uniport_ID	Q8N8I0
HGNC ID	HGNC:31750
VEGA ID	OTTHUMG00000059817
OMIM ID	618073
String ID	9606.ENSP00000314173
PharmGKB ID	PA134993493

Target gene [SAMD12] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1005598	chr8	35	15	1	51	View
1005740	chr8	19	17	13	49	View
1018289	chr8				0	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of SAMD12 expression and immune infiltrating cell level correlation result in HBV+ samples
SAMD12 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).