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HIV Target gene Detail Information

> RYK Gene Search Result


Gene Information
Gene Name RYK
Gene ID 6259
Gene Full Name receptor-like tyrosine kinase
Gene Alias JTK5; RYK1; JTK5A; D3S3195
Transcripts ENSG00000163785
Virus HIV
Gene Type protein coding
HPA Location Info Golgi apparatus;Cytosol;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Predicted membrane proteins
HGNC ID HGNC:10481
VEGA ID OTTHUMG00000159750
OMIM ID 600524
String ID 9606.ENSP00000478721
PharmGKB ID PA34894
Target gene [RYK] related to VISs
DVIDChromosomeHMTFBSCASum of Overlapped RecordsDetail
4004308 chr3 46 46 View
Showing 1 to 1 of 1 entries
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Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of RYK expression and immune infiltrating cell level correlation result in HIV+ samples
RYK expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of RYK expression and immune infiltrating cell level correlation result in HIV+ samples
RYK expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).