HBV Target gene Detail Information

> RWDD2B Gene Search Result


Gene Information
Gene Name RWDD2B
Gene ID 10069
Gene Full Name RWD domain containing 2B
Gene Alias GL011; C21orf6
Transcripts ENSG00000156253
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Predicted intracellular proteins
Uniport_ID P57060
HGNC ID HGNC:1302
VEGA ID OTTHUMG00000078805
OMIM ID 617843
String ID 9606.ENSP00000418693
PharmGKB ID PA162402318
Target gene [RWDD2B] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1009779 chr21 14 14 View
1009780 chr21 14 14 View
1009839 chr21 13 1 14 View
1404677 chr21 4038 2232 1283 7553 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of RWDD2B expression and immune infiltrating cell level correlation result in HBV+ samples
RWDD2B expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).