HBV Target gene Detail Information

> RTP2 Gene Search Result

Gene Information

Gene Name	RTP2
Gene ID	344892
Gene Full Name	receptor transporter protein 2
Gene Alias	Z3CXXC2
Transcripts	ENSG00000198471
Virus	HBV
Gene Type	protein coding
HPA Location Info
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Predicted membrane proteins
Uniport_ID	Q5QGT7
HGNC ID	HGNC:32486
VEGA ID	OTTHUMG00000156458
OMIM ID	609138
String ID	9606.ENSP00000350976
PharmGKB ID	PA143485605

Target gene [RTP2] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
1004398	chr3	54	25	4	83	View
1004455	chr3	53	24	4	81	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
LIHC (TCGA)	Liver hepatocellular carcinoma	424	Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: LIHC
HeatMap of cell type fractions in all samples	Lollipop of RTP2 expression and immune infiltrating cell level correlation result in HBV+ samples
RTP2 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).