HTLV1 Target gene Detail Information

> RTN1 Gene Search Result

Gene Information

Gene Name	RTN1
Gene ID	6252
Gene Full Name	reticulon 1
Gene Alias	NSP
Transcripts	ENSG00000139970
Virus	HTLV1
Gene Type	protein coding
HPA Location Info	Endoplasmic reticulum;Nuclear bodies;
Membrane Info	Predicted membrane proteins
HPA Protein Class Info	Plasma proteins, Predicted membrane proteins
Uniport_ID	Q16799
HGNC ID	HGNC:10467
VEGA ID	OTTHUMG00000028947
OMIM ID	600865
String ID	9606.ENSP00000267484
PharmGKB ID	PA34880

Target gene [RTN1] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
6000262	chr14	1839	250	419	2508	View
6006878	chr14	33	15	14	62	View
6011759	chr14	19	4	2	25	View
6014337	chr14	7	6	4	17	View
6024586	chr14	1	2		3	View
6028224	chr14	1			1	View

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).