HBV Target gene Detail Information

> RTN1 Gene Search Result


Gene Information
Gene Name RTN1
Gene ID 6252
Gene Full Name reticulon 1
Gene Alias NSP
Transcripts ENSG00000139970
Virus HBV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;Nuclear bodies;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Plasma proteins, Predicted membrane proteins
Uniport_ID Q16799
HGNC ID HGNC:10467
VEGA ID OTTHUMG00000028947
OMIM ID 600865
String ID 9606.ENSP00000267484
PharmGKB ID PA34880
Target gene [RTN1] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1011376 chr14 6 3 9 View
1011743 chr14 8 8 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).