HIV Target gene Detail Information

> RTCB Gene Search Result


Gene Information
Gene Name RTCB
Gene ID 51493
Gene Full Name RNA 2',3'-cyclic phosphate and 5'-OH ligase
Gene Alias FAAP; HSPC117; C22orf28; DJ149A16.6
Transcripts ENSG00000100220
Virus HIV
Gene Type protein coding
HPA Location Info Nucleoplasm;Cytosol;Vesicles;
HPA Protein Class Info Enzymes, Predicted intracellular proteins
Uniport_ID Q9Y3I0
HGNC ID HGNC:26935
VEGA ID OTTHUMG00000030300
OMIM ID 613901
String ID 9606.ENSP00000216038
Drugbank ID BE0004442
PharmGKB ID PA145149387
Target gene [RTCB] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4006698 chr22 23 23 View
4009956 chr22 9 1 10 View
4012111 chr22 3 2 5 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).