HPV Target gene Detail Information

> RRN3 Gene Search Result


Gene Information
Gene Name RRN3
Gene ID 54700
Gene Full Name RRN3 homolog, RNA polymerase I transcription factor
Gene Alias TIFIA; A-270G1.2
Transcripts ENSG00000278494
Virus HPV
Gene Type protein coding
HPA Location Info Nucleoli rim;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins
Uniport_ID Q9NYV6
HGNC ID HGNC:30346
VEGA ID OTTHUMG00000191080
OMIM ID 605121
String ID 9606.ENSP00000198767
PharmGKB ID PA134878601
Target gene [RRN3] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
5201792 chr16 3 3 View

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).