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HBV Target gene Detail Information

> RPS9 Gene Search Result


Gene Information
Gene Name RPS9
Gene ID 6203
Gene Full Name ribosomal protein S9
Gene Alias S9
Transcripts ENSG00000274646
Virus HBV
Gene Type protein coding
HPA Location Info
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Ribosomal proteins
Uniport_ID P46781
HGNC ID HGNC:10442
VEGA ID OTTHUMG00000149856
OMIM ID 603631
String ID 9606.ENSP00000302896
Drugbank ID BE0009042
PharmGKB ID PA34857
Target gene [RPS9] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
1004069 chr19 69 26 95 View
1005417 chr2 54 1 55 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE114783 (GEO) Chronic HBV (CHB) infection 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Hepatocellular carcinoma 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
GSE114783 (GEO) Liver cirrhosis 36 Chronic hepatitis B patients (HBV+)(10),Hepatocellular carcinoma (HBV+)(10),Liver cirrhosis(HBV+)(10),Normal(3),HBV carriers (3)
LIHC (TCGA) Liver hepatocellular carcinoma 424 Liver hepatocellular carcinoma HCV (HBV+)(86), Liver hepatocellular carcinoma HCV (HBV-)(19), Liver hepatocellular carcinoma (HBV+)(209), Liver hepatocellular carcinoma (HBV+)(60), Paracancerous HCV (HBV+)(4), Paracancerous (HBV-)(28), Paracancerous (HBV+)(18)

> Dataset: GSE114783

HeatMap of cell type fractions in all samples Lollipop of RPS9 expression and immune infiltrating cell level correlation result in HBV+ Chronic HBV (CHB) infection samples
RPS9 expression: Low -> High
Lollipop of RPS9 expression and immune infiltrating cell level correlation result in HBV+ Liver cirrhosis samples Lollipop of RPS9 expression and immune infiltrating cell level correlation result in HBV+ Hepatocellular carcinoma samples

> Dataset: LIHC

HeatMap of cell type fractions in all samples Lollipop of RPS9 expression and immune infiltrating cell level correlation result in HBV+ samples
RPS9 expression: Low -> High
Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).