HIV Target gene Detail Information

> RPS11 Gene Search Result

Gene Information

Gene Name	RPS11
Gene ID	6205
Gene Full Name	ribosomal protein S11
Gene Alias	S11
Transcripts	ENSG00000142534
Virus	HIV
Gene Type	protein coding
HPA Location Info	Cytosol;Endoplasmic reticulum;Nucleoli;
HPA Protein Class Info	Plasma proteins, Predicted intracellular proteins, Ribosomal proteins
Uniport_ID	P62280
HGNC ID	HGNC:10384
VEGA ID	OTTHUMG00000183156
OMIM ID	180471
String ID	9606.ENSP00000270625
PharmGKB ID	PA34782

Target gene [RPS11] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4000465	chr19	445			445	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO)	HIV-infected disease	44	HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RPS11 expression and immune infiltrating cell level correlation result in HIV+ samples
RPS11 expression: Low -> High

> Dataset: GSE50834
HeatMap of cell type fractions in all samples	Lollipop of RPS11 expression and immune infiltrating cell level correlation result in HIV+ samples
RPS11 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).