HIV Target gene Detail Information

> RPS11 Gene Search Result


Gene Information
Gene Name RPS11
Gene ID 6205
Gene Full Name ribosomal protein S11
Gene Alias S11
Transcripts ENSG00000142534
Virus HIV
Gene Type protein coding
HPA Location Info Cytosol;Endoplasmic reticulum;Nucleoli;
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Ribosomal proteins
Uniport_ID P62280
HGNC ID HGNC:10384
VEGA ID OTTHUMG00000183156
OMIM ID 180471
String ID 9606.ENSP00000270625
PharmGKB ID PA34782
Target gene [RPS11] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4000465 chr19 445 445 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of RPS11 expression and immune infiltrating cell level correlation result in HIV+ samples
RPS11 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of RPS11 expression and immune infiltrating cell level correlation result in HIV+ samples
RPS11 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).