HIV Target gene Detail Information

> RPP30 Gene Search Result

Gene Information

Gene Name	RPP30
Gene ID	10556
Gene Full Name	ribonuclease P/MRP subunit p30
Gene Alias	TSG15
Transcripts	ENSG00000148688
Virus	HIV
Gene Type	protein coding
HPA Location Info	Nucleoli;Nucleoplasm;Cytosol;Microtubule ends;
HPA Protein Class Info	Enzymes, Plasma proteins, Predicted intracellular proteins
Uniport_ID	P78346
HGNC ID	HGNC:17688
VEGA ID	OTTHUMG00000018733
OMIM ID	606115
String ID	9606.ENSP00000389182
PharmGKB ID	PA134876345

Target gene [RPP30] related to VISs

DVID	Chromosome	HM	TFBS	CA	Sum of Overlapped Records	Detail
4007233	chr10	18	2		20	View
4011681	chr10	4	2		6	View

Relationship between gene expression and immune infiltrating cell level

Data ID	Disease	Sample number	Sample type
GSE17372 (GEO)	AIDS-associated lymphoma	17	AIDS-Related Lymphomas (HIV+)(17)

> Dataset: GSE17372
HeatMap of cell type fractions in all samples	Lollipop of RPP30 expression and immune infiltrating cell level correlation result in HIV+ samples
RPP30 expression: Low -> High

Contents
Description

Gene Information Note

Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).