HIV Target gene Detail Information

> RPN2 Gene Search Result


Gene Information
Gene Name RPN2
Gene ID 6185
Gene Full Name ribophorin II
Gene Alias SWP1; RPNII; RIBIIR; RPN-II
Transcripts ENSG00000118705
Virus HIV
Gene Type protein coding
HPA Location Info Endoplasmic reticulum;
Membrane Info Predicted membrane proteins
HPA Protein Class Info Plasma proteins, Predicted intracellular proteins, Predicted membrane proteins
Uniport_ID P04844
HGNC ID HGNC:10382
VEGA ID OTTHUMG00000032409
OMIM ID 180490
String ID 9606.ENSP00000237530
PharmGKB ID PA34778
Target gene [RPN2] related to VISs
DVID Chromosome HM TFBS CA Sum of Overlapped Records Detail
4004896 chr20 33 5 38 View

Relationship between gene expression and immune infiltrating cell level
Data ID Disease Sample number Sample type
GSE17372 (GEO) AIDS-associated lymphoma 17 AIDS-Related Lymphomas (HIV+)(17)
GSE50834 (GEO) HIV-infected disease 44 HIV infected (23), HIV/TB co-infected (21)

> Dataset: GSE17372

HeatMap of cell type fractions in all samples Lollipop of RPN2 expression and immune infiltrating cell level correlation result in HIV+ samples
RPN2 expression: Low -> High

> Dataset: GSE50834

HeatMap of cell type fractions in all samples Lollipop of RPN2 expression and immune infiltrating cell level correlation result in HIV+ samples
RPN2 expression: Low -> High

Contents
Description

Gene Information Note

  • Integration Table: if previous studies reported that target gene was altered by virus integration events, the overlap between VISs in this literature and Cistrome factors was listed in the "Target gene [gene] related to VIS" section

Immune Analysis Plot Note

  • Left: Heatmap of target gene expression and the level of various types of immune cells (cell type fractions) in all samples based on CIBERSORT method.
  • Right: Correlation of target gene expression and the level of various types of immune cells in virus positive samples (Pearson Correlation Coefficient).